Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPFGFTPKARHNRGVALRSTYRLDGWVMGPVDKEGWGLSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQQFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGLFKPTSPPVLPPMFNQ-------NTAIIMGGTGSPIPTPSYVNAITTLFIDPVV---SNPVVKALVTPEELYPITGVKSLPFQTSVQLG-LQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDNPYPTTTYTLEYDGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQGTTSNTYYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADALVAGTQQGVNDFMVELPAALNTLPQTPMPAFPPYVPTLLPPPPPPQPATLINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTLFVNQLAAGNLRAAIELPLAATIGLAALGGMIEFIAIVVTLADITQQLQSFSI |
| 1GZ3 Chain:A ((346-452)) | ------------------------------------------------------------------------------------------------------------------------------------------------FTHSAPESIPDTFEDAVNILKPSTIIGVAGAGR-LFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAYTLTEGRCL-FASGSPFGPVKLTDGRVFTP-GQGNNVYIF--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1GZ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -41426 for 612 contacts (-67.7/contact) +
2D Compatibility (PS) -9988 + (NN) -2666 + (LL) 30496
1D Compatibility (HY) -5200 + (ID) 1550
Total energy: -30334.0 ( -49.57 by residue)
QMean score : 0.201
|
|
|