Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMS------GTNAIHGIVVLGALVVFGEIEHPSLVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEALR
3UXY Chain:A ((188-245))
------------------GIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLA----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3UXY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14106 for 254 contacts (-55.5/contact) +
2D Compatibility (PS) -5403 + (NN) 1411 + (LL) 4524
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -17974.0 ( -70.76 by residue)
QMean score : 0.211
(partial model without unconserved sides chains):
PDB file :
Tito_3UXY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UXY-query.scw
PDB file :
Tito_Scwrl_3UXY.pdb
: