Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTATVEIRRAADRAVTTTSWLKSRHSFSFGDHYDPDNTHHGLLLVNNDDQMEPASGFDPHPHRDMEIVTWVLRG-ALRHQDSAGNSGVIYPGLAQRMSAGTGILHSEMNDSATEPVHFVQMWVIPDATGITASYQQQEIDDELL----RAGLVTIASGIPGQDAAL--TLHNSSASLH-GARLRPGATVSLPCAPFLHLFV-------------AYGRLTLEGGGELADGDAVRFTDADARG----LTANEPSEVLIWEMHAKLGDSAT |
| 4EWD Chain:A ((52-245)) | -------------------------------------------------------GFPDHPHRGFETVSYLLEGGSMAHEDFCGHTGKMNPGDLQWMTAGRGILHAEM-PCSEEPAHGLQLWVNLRSSEKMVEPQYQELKSEEIPKPSKDG-VTVAV-ISGEALGIKSKVYTRTPTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIGPDDAQQKIEPHHTAVLGEGDSVQVENKDPKRSHFVLIAGEP----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52338 for 1126 contacts (-46.5/contact) +
2D Compatibility (PS) -17868 + (NN) -2740 + (LL) 4340
1D Compatibility (HY) -7200 + (ID) 3000
Total energy: -78806.0 ( -69.99 by residue)
QMean score : 0.288
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