Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSLPISGLQAIGLMQAVQGARR
2YFH Chain:A ((8-70))
---------------------------VIAEVEKKYADEP----EFVQTVEEVLSSLGPVVDAHPEYEEV--ALLERMVIPERVIEFRVPWE--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2YFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6402 for 290 contacts (-22.1/contact) +
2D Compatibility (PS) -6034 + (NN) 1122 + (LL) 6184
1D Compatibility (HY) -6000 + (ID) 1050
Total energy: -12180.0 ( -42.00 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_2YFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YFH-query.scw
PDB file :
Tito_Scwrl_2YFH.pdb
: