Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKEKISVTVDAAVLAAIDADARAAGLNRSEMIEQALRNEHLRVALRDYT---A-KTVPALDIDAYAQRVYQANRAAGS
2K5J Chain:A ((8-79))
-DMGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQSQTARTSVPGIWQGCEEDGVEYQRKLREE------
General information:
TITO was launched using:
RESULT:
Template:
2K5J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6263 for 249 contacts (-25.2/contact) +
2D Compatibility (PS) -7434 + (NN) -2988 + (LL) 316
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -19219.0 ( -77.18 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_2K5J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K5J-query.scw
PDB file :
Tito_Scwrl_2K5J.pdb
: