Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPKPADHRNHAAVSTSVLSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLSGHDEESPGAQSLTSTLT-APDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKC---EPNSVAPTGGAPGNFLSAGGHYHVPGHT---GTPAS-----GDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG |
1IBH Chain:A ((1-150)) | ---------------------------------------------------------------------QDLTVKMTDLQTGKPVGTIELS-QNKYGVVFIPE--LADLTPGIHGFHIHQNGSCASSEKDGKVVLGGA------AGGHYD-PEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPVLAPRLTLKEL---KGHAIMIHAGGDNHSDMPK-----------------ALGGGGARVACGVI--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1IBH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -55920 for 1046 contacts (-53.5/contact) +
2D Compatibility (PS) -15270 + (NN) -10402 + (LL) 2160
1D Compatibility (HY) -8800 + (ID) 3200
Total energy: -91432.0 ( -87.41 by residue)
QMean score : 0.436
|
|
|