Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVPVVSPGPLVPVADFGPLDRLRGWIVTGLITLLATVTRFLNLGSLTDAGTPIFDEKHYAPQAWQVLNNHGVEDNPGYGLVVHPPVGKQLIAIGEAIFGYNGFGWRFTGALLGVVLVALVVRIVRRISRSTLVGAIAGVLLICDGVSFVTARTALLDGFLTFFVVAAFGALIVDRDQVRERMHIALLAGRSAATVWGPRVGVRWWRFGAGVLLGLACATKWSGVYFVLFFGAMALAFDVAARRQYQVQRPWLGTVRRDVLPSGYALGLIPFAVYLATYAPWFASETAIDRHAVGQAVGRNSVVPLPDAVRSLWHYTAKAFHFHAGLTNSAGNYHPWESKPWTWPMSLRPVLYAIDQQ---DVAGCGAQSCVKAEM--LVGTPAMWWLAVPVLAYAGWRMFVRRDW-RYAVVLVGYCAGWLPWFADIDRQMYFFYAATMAPFLVMGISLVLGDILYHPGQGSERRTLGLIVVCCYVALVVTNFAWLYPVLTGLPISQQTWNLEIWLPSWR |
| 2GNG Chain:A ((166-247)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLKPENLLIDQQGYIKVADFGFAKRVKGRTWTLCGTPE--YLAPEIILSKGYNKAV--DWWALGVLIYEMAAGYPPFFADQPIQIY------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GNG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43816 for 420 contacts (-104.3/contact) +
2D Compatibility (PS) -7421 + (NN) 851 + (LL) 31840
1D Compatibility (HY) -6000 + (ID) 1500
Total energy: -26046.0 ( -62.01 by residue)
QMean score : 0.008
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