Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSHDWTDNRKNLMLFAGRAHPELAEQVAKELDVHVTSQDAREFANGEIFVRFHESVRGCDAFVLQSCPAPVNRWLMEQLIMIDALKRGSAKRITAVMPFYPYARQDKKHRGREPISARLIADLLKTAGADRIVTVDLHTDQIQGFFDGPVDHMRGQNLLTGYIRDNYPDG-NMVVVSPDSGRVRIAEKWADALGGVPLAFIHKTRDPRVPNQVVSNRVVGDVAGRTCVLIDDMIDTGGTIAGAVALLHNDGAGDVIIAATHGVLSDPAAQRLASCGAREVIVTNTLPIGED--KRFPQLTVLSIAPLLASTIRAVFENGSVTGLFDGDA
2HCR Chain:A ((3-313))----------NIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRL-NVDFALIHKER--------DRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIP-QEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLF----


General information:
TITO was launched using:
RESULT:

Template: 2HCR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -282851 for 2583 contacts (-109.5/contact) +
2D Compatibility (PS) -34485 + (NN) -26982 + (LL) 384
1D Compatibility (HY) -27200 + (ID) 6700
Total energy: -377834.0 ( -146.28 by residue)
QMean score : 0.614

(partial model without unconserved sides chains):
PDB file : Tito_2HCR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HCR-query.scw
PDB file : Tito_Scwrl_2HCR.pdb: