Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKYLDVDGIGQVSRIGLGTWQFGSREWGYGDRYATGAARDIVKRARALGVTLFDTAEIYGLGKSERILGEALGD--DRTEVVVASKVFPVAPFPAVIKNRERA--------SARRLQLNRIPLYQIHQPNPVVPDSVIMPGMRDLLDSGDIGAAGVSNYSLARWRKADAALGRPVVSNQVHFSLAHPDALEDLVPFAELENRIVIAYSPLAQGLLGGKYGLENRPGG--VRALNPLFGTENLRRIEPLLATLRAIAVDVDAKPA-QVALAWLISLPGV-VAIPGASSVEQLEFNVAAADIELSAQSRDALTDAARAFRPVSTGRFLTDMVREKVSRR |
| 1PZ1 Chain:A ((12-288)) | ----------EASRIGLGTWAIGGTMWGGTDE---KTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYMKRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVA--PLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMTEEYTFEGDDLRNHDPKFQKPRFKEYLSAVNQLDKLAKTRYGKSVIHLAVRWILDQPGADIALWGARKPGQLE--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PZ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118524 for 1954 contacts (-60.7/contact) +
2D Compatibility (PS) -28580 + (NN) -12230 + (LL) 4352
1D Compatibility (HY) -12800 + (ID) 4450
Total energy: -172232.0 ( -88.14 by residue)
QMean score : 0.500
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