Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAALVREVVGDVLRGARMSQGRTLREVSDSARVSLGYLSEIERG-RKEPSSELLSAICTALQLPLSVVLIDAGERMARQERLARATPAGRATGATIDASTKVVIAPVVSLAVA
3ZKC Chain:A ((2-62))
--------IGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLL--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ZKC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39111 for 389 contacts (-100.5/contact) +
2D Compatibility (PS) -6149 + (NN) 187 + (LL) 5072
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -45301.0 ( -116.46 by residue)
QMean score : 0.639
(partial model without unconserved sides chains):
PDB file :
Tito_3ZKC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZKC-query.scw
PDB file :
Tito_Scwrl_3ZKC.pdb
: