Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKMMQGAAALIALVGAGESMALEWMSNSVGFRYGQQFTNPNNPDKFAKRIYSFTHADGYRYGSNFFNLDVFLSDNRDPRKGTDHGGSEVYAVYRHQLYASRVFDRPLGTGLVKDYAFTLGFDASRNNNLASAKKRALVFGPTLKFNGPGVLDLSLLYYREKNHFGVPGARHPDHTFDTTYMLNLTWMRPFKVGNHAAKFQGFVNYVGDKGEDYNDKHTAAETLVRTALMVAALPGDKRQPNLWLGVGYEYWHNKFGVDGGTGSRTSTPTLNMEFTF |
| 3WVJ Chain:A ((144-202)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QDFHTYGFEWRPDYIDFYVDGKKVYRGTRNIPVTPG-KIMMNLWPGIGVDEWLGRY--DGRTPLQAEYEYVKYYPNG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WVJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7990 for 225 contacts (35.5/contact) +
2D Compatibility (PS) -5898 + (NN) 3346 + (LL) 10040
1D Compatibility (HY) -2000 + (ID) 950
Total energy: 12528.0 ( 55.68 by residue)
QMean score : -0.320
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