Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLLKPLLQQGITPDRERLSDVQVRGSVFILDGVEYDF--------GRMQPGGYLPPEAYHDTPFIDIRFVDGDRLYLHYIHQVTSEVMMQFPREIESIPVDQDGKVEVAFSYEHPMG
2WJ5 Chain:A ((23-92))
----------------SPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGV--DPAAVTSALSPEGVLSIQATPASAQASLPS---------------------------
General information:
TITO was launched using:
RESULT:
Template:
2WJ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27584 for 324 contacts (-85.1/contact) +
2D Compatibility (PS) -6912 + (NN) -4206 + (LL) 3572
1D Compatibility (HY) 1600 + (ID) 400
Total energy: -33930.0 ( -104.72 by residue)
QMean score : 0.185
(partial model without unconserved sides chains):
PDB file :
Tito_2WJ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WJ5-query.scw
PDB file :
Tito_Scwrl_2WJ5.pdb
: