Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKSELIERIVTHQGQLSAKDVELAIKTMLEQMSQALATGDRIEIRGFGSFSLHYRAPRVGRNPKTGESVRLDGKFVPHFKPGKELRDRVNEPE
2IIF Chain:A ((141-192))
---------------------------------------GERIEIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRAN---
General information:
TITO was launched using:
RESULT:
Template:
2IIF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5751 for 244 contacts (23.6/contact) +
2D Compatibility (PS) -5714 + (NN) -1981 + (LL) 4252
1D Compatibility (HY) -4000 + (ID) 2200
Total energy: -3892.0 ( -15.95 by residue)
QMean score : 0.372
(partial model without unconserved sides chains):
PDB file :
Tito_2IIF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IIF-query.scw
PDB file :
Tito_Scwrl_2IIF.pdb
: