Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAISMTEAAAKHVQRSLEGRGKGEGIRLGVRTTG--CSGLAYVLEFVDELAAEDLVFESHGVKVIIDPKSLVYLDGTELDFTREGLNEGFKF--NNPNVRGECGCGESFNV
2APN Chain:A ((7-114))
VPLTFTDAAANKV-KSLISEEENTDLKLRVYITGGGCSGFQYGFTFDEKVNDGDLTIEKSGVQLVIDPMSLQYLIGGTVDYT-EGL-EGSRFTVNNPNATSTCGCGSSFSI
General information:
TITO was launched using:
RESULT:
Template:
2APN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48206 for 728 contacts (-66.2/contact) +
2D Compatibility (PS) -11481 + (NN) -5205 + (LL) 140
1D Compatibility (HY) -10000 + (ID) 2350
Total energy: -77102.0 ( -105.91 by residue)
QMean score : 0.381
(partial model without unconserved sides chains):
PDB file :
Tito_2APN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2APN-query.scw
PDB file :
Tito_Scwrl_2APN.pdb
: