Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEADYLRLLTRQAEQANDFLSNARKWDRERWVCQRFLEALNVPYRQEDFAAPGEQPPDVLFKGAGFEVFFVLDEGRRLNEEWREELTRRRQAVSLRQLIRREERPQRIAAAELQARLAPTLRKKAHNYSERGIDHGELDLLAFVNLKRAVPDFNTPFPPPTEYLRQGWRSLSMVGPTFARVLFAHSGAPEFLRANLGRSILFDAGVGL |
| 3EPO Chain:A ((290-311)) | LNWEVFRDTLIEQCEQGVDYFT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3EPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -455 for 79 contacts (-5.8/contact) +
2D Compatibility (PS) -2516 + (NN) -1514 + (LL) 13136
1D Compatibility (HY) -1200 + (ID) 300
Total energy: 7151.0 ( 90.52 by residue)
QMean score : 0.528
|
|
|