Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSDVIKGKWKQLTGKIKERWG-DLTDDDLQAADGHA----EYLVGKLQERYGWSKERAEQEVRDFSDRL
1QS1 Chain:A ((285-336))
------------------EEWAKDLTDSQREALDGYARQDYKEINNYLRNQGGSGNEKLDAQIKNISDAL
General information:
TITO was launched using:
RESULT:
Template:
1QS1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7718 for 249 contacts (31.0/contact) +
2D Compatibility (PS) -5130 + (NN) -2469 + (LL) 1104
1D Compatibility (HY) -800 + (ID) 800
Total energy: -377.0 ( -1.51 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_1QS1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QS1-query.scw
PDB file :
Tito_Scwrl_1QS1.pdb
: