Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQMPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNRNV
3IMJ Chain:A ((3-103))
------------------------------------------------------MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVP--------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3IMJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63335 for 679 contacts (-93.3/contact) +
2D Compatibility (PS) -10817 + (NN) -7340 + (LL) 5740
1D Compatibility (HY) -14000 + (ID) 5000
Total energy: -94752.0 ( -139.55 by residue)
QMean score : 0.296
(partial model without unconserved sides chains):
PDB file :
Tito_3IMJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IMJ-query.scw
PDB file :
Tito_Scwrl_3IMJ.pdb
: