Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTLKTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVECVMNNVTCTRIYEKVE
4AZP Chain:A ((5-138))
-ASLKDLEGKWRLMESHGFEEYMKELGVGLALRKMAAMAKPDCIITCDGNNITVKTESTVKTTVFSCNLGEKFDETTADGRKTETVCTFQDGALVQHQQWDGKESTITRKLKDGKMIVECVMNNATCTRVYEKVQ
General information:
TITO was launched using:
RESULT:
Template:
4AZP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47686 for 989 contacts (-48.2/contact) +
2D Compatibility (PS) -14882 + (NN) -2411 + (LL) 208
1D Compatibility (HY) -16800 + (ID) 5350
Total energy: -86921.0 ( -87.89 by residue)
QMean score : 0.545
(partial model without unconserved sides chains):
PDB file :
Tito_4AZP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AZP-query.scw
PDB file :
Tito_Scwrl_4AZP.pdb
: