Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGELANYKRLEKVGEGTYGVVYKALDLRPGQGQRVVALKKIRLESEDEGVPSTAIREISLLKELKDDNIVRLYDIVHSDAHKLYLVFEFLDLDLKRYME-----GIPKDQPLGADIVKKFMMQLCKGIAYCHSHRILHRDLKPQNLLINKDGNLKLGDFGLARAFGVPLRAYTHEIVTLWYRAPEVLLGGKQYSTGVDTWSIGCIFAEMCNRKPIFSGDSEIDQIFKIFRVLGTPNEAIWPDIVYLPDFKPSFPQWRRKDLSQVVPSLDPRGIDLLDKLLAYDPINRISARRAAIHPYFQES |
4EOM Chain:A ((3-292)) | --GSMENFQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRL--ETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLSMDLKKFMDASALTGIP------LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EOM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186184 for 2206 contacts (-84.4/contact) +
2D Compatibility (PS) -29739 + (NN) -10106 + (LL) 392
1D Compatibility (HY) -38800 + (ID) 9250
Total energy: -273687.0 ( -124.06 by residue)
QMean score : 0.513
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