Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNPPDESGPGCMSCKCVLS
1WQ1 Chain:R ((1-166))
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1WQ1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94077 for 1330 contacts (-70.7/contact) +
2D Compatibility (PS) -18337 + (NN) -5596 + (LL) 488
1D Compatibility (HY) -23200 + (ID) 8250
Total energy: -148972.0 ( -112.01 by residue)
QMean score : 0.702
(partial model without unconserved sides chains):
PDB file :
Tito_1WQ1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WQ1-query.scw
PDB file :
Tito_Scwrl_1WQ1.pdb
: