Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRLKKISKEEKTPGCVKIKKCIIM
4LRW Chain:A ((3-168))
-TEYKLVVVGACGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETSLLDILDTA-----------YMRTGEGFLLVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKSDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREIRKHK----------------------
General information:
TITO was launched using:
RESULT:
Template:
4LRW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110131 for 1243 contacts (-88.6/contact) +
2D Compatibility (PS) -16949 + (NN) -6442 + (LL) 2796
1D Compatibility (HY) -20000 + (ID) 7300
Total energy: -158026.0 ( -127.13 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_4LRW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LRW-query.scw
PDB file :
Tito_Scwrl_4LRW.pdb
: