Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPIPNNPGAGENAFDPVFVNDDDGYDLDSFMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPLWNGFKADFVGFSIPDHFVVGYSLDYNEIFRDLDHCCLVNDEGKKKYKATSL
1FSG Chain:A ((13-232))
-------GKGKGRIEPMYIPDNTFYNADDFLVPPHCKPYIDKILLPGGLVKDRVEKLAYDIHRTYFGEELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVPPFFEHYVRLKSYQNDNSTGQLTVLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRTDRSNSLKGDFVGFSIEDVWIVGCCYDFNEMFRDFDHVAVLSDAARKKFE----
General information:
TITO was launched using:
RESULT:
Template:
1FSG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -192106 for 1734 contacts (-110.8/contact) +
2D Compatibility (PS) -23840 + (NN) -11836 + (LL) 176
1D Compatibility (HY) -25200 + (ID) 5650
Total energy: -258456.0 ( -149.05 by residue)
QMean score : 0.718
(partial model without unconserved sides chains):
PDB file :
Tito_1FSG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FSG-query.scw
PDB file :
Tito_Scwrl_1FSG.pdb
: