Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVVGVDVIHSIEDIYQLPGHVFIFGGQILFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
3SRR Chain:X ((2-158))
-TLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRK-
General information:
TITO was launched using:
RESULT:
Template:
3SRR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131043 for 1180 contacts (-111.1/contact) +
2D Compatibility (PS) -16380 + (NN) -3741 + (LL) 272
1D Compatibility (HY) -23200 + (ID) 7750
Total energy: -181842.0 ( -154.10 by residue)
QMean score : 0.544
(partial model without unconserved sides chains):
PDB file :
Tito_3SRR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SRR-query.scw
PDB file :
Tito_Scwrl_3SRR.pdb
: