Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRMLLALLALSAARPSASAESHWCYEVQAESSNYPCLVPVKWGGNCQKDRQSPINIVTTKAKVDKKLGRFFFSGYDKKQT--WTVQNNGHSVMMLLENKASISGGGLPAPYQAKQLHLHWSDL-PYKGSEHSLDGEHFAMEMHIVHEKEKGTSRNVKEAQDPEDEIAVLAFLVEAGTQVNEGFQPLVEALSNIPKPEMSTTMAESSLLDLLPKEEKLRHYFRYLGSLTTPTCDEKVVWTVFREPIQLHREQILAFSQKLYYDKEQ-TVSMKDNVRPLQQLGQRTVIKSGAPGRPLPWALPALLGPMLACLLAGFLR |
| 1RJ6 Chain:A ((4-260)) | ---------------------HWTYEGPHGQDHWPTSYP-----ECGGDAQSPINIQTDSVIFDPDLPAVQPHGYDQLGTEPLDLHNNGHTVQLSL--PPTLHLGGLPRKYTAAQLHLHWGQRGSLEGSEHHINSEATAAELHVVHYDSQSYSSLSEAAQKPQG-LAVLGILIEVGETENPAYDHILSRLHEIRYKDQKTSVPPFSVRELFPQ--QLEQFFRYNGSLTTPPCYQSVLWTVFNRRAQISMGQLEKLQETLSSTEEDPSEPLVQNYRVPQPLNQRTIFAS---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RJ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85733 for 2062 contacts (-41.6/contact) +
2D Compatibility (PS) -26854 + (NN) -9733 + (LL) 4108
1D Compatibility (HY) -15600 + (ID) 4700
Total energy: -138512.0 ( -67.17 by residue)
QMean score : 0.297
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