Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRSRRVDVMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFRGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESIKDLLNP
3LTP Chain:A ((8-225))
-------VMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESIKDL---
General information:
TITO was launched using:
RESULT:
Template:
3LTP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -182019 for 1910 contacts (-95.3/contact) +
2D Compatibility (PS) -23483 + (NN) -6231 + (LL) 552
1D Compatibility (HY) -31600 + (ID) 10850
Total energy: -253631.0 ( -132.79 by residue)
QMean score : 0.813
(partial model without unconserved sides chains):
PDB file :
Tito_3LTP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LTP-query.scw
PDB file :
Tito_Scwrl_3LTP.pdb
: