Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKPMFTLEERVALAQQATAHLGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA
3L93 Chain:A ((4-162))
MITKAIYPGTFDPITNGHLDLVTRASAMFSHVILAIADSSSKKPMFTLDERVALAKKVTAPLKNVEVLGFSELMAEFAKKHNANILVRGLRSVSDFEYEWQLANMNRHLMPKLESVFLIPSEKWSFISSSLVKEVARHGGDITPFLPKPVTKALLAKLA
General information:
TITO was launched using:
RESULT:
Template:
3L93.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114634 for 1241 contacts (-92.4/contact) +
2D Compatibility (PS) -17066 + (NN) -8457 + (LL) 0
1D Compatibility (HY) -22800 + (ID) 5850
Total energy: -168807.0 ( -136.02 by residue)
QMean score : 0.738
(partial model without unconserved sides chains):
PDB file :
Tito_3L93.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L93-query.scw
PDB file :
Tito_Scwrl_3L93.pdb
: