Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRDITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYES
3MLA Chain:A ((3-190))
MRKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRNITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYE-
General information:
TITO was launched using:
RESULT:
Template:
3MLA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -157194 for 1441 contacts (-109.1/contact) +
2D Compatibility (PS) -20885 + (NN) -13719 + (LL) -28
1D Compatibility (HY) -30000 + (ID) 9350
Total energy: -231176.0 ( -160.43 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_3MLA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MLA-query.scw
PDB file :
Tito_Scwrl_3MLA.pdb
: