Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAAGRLFLSRLRAPFSSMAKSPLEGVSSSRGLHAGRGPRRLSIEGNIAVGKSTFVKLLTKTYPEWHVATEPVATWQNIQAAGTQKACTAQSLGNLLDMMYREPARWSYTFQTFSFLSRLKVQLEPFPEKLLQARKPVQIFERSVYSDRYIFAKNLFENGSLSDIEWHIYQDWHSFLLWEFASRITLHGFIYLQASPQVCLKRLYQRAREEEKGIELAYLEQLHGQHEAWLIHKTTKLHFEALMNIPVLVLDVNDDFSEEVTKQEDLMREVNTFVKNL
2A7Q Chain:A ((23-263))
------------------------------------RIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQST---------NGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKD---KYESLVEKVKEFLSTL
General information:
TITO was launched using:
RESULT:
Template:
2A7Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122866 for 1770 contacts (-69.4/contact) +
2D Compatibility (PS) -23977 + (NN) -3621 + (LL) 2948
1D Compatibility (HY) -26800 + (ID) 6000
Total energy: -180316.0 ( -101.87 by residue)
QMean score : 0.371
(partial model without unconserved sides chains):
PDB file :
Tito_2A7Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A7Q-query.scw
PDB file :
Tito_Scwrl_2A7Q.pdb
: