Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAMVVSTWRDPQDEVPGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQGGPGGPGSDKQQQQQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQPTHGQFALTNGDPLNCHSYLSGYISLLLRAEPYPTSRFGSQCMQPNNIMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDMLLSGSSFNWPYMAIQ
4LOG Chain:A ((375-566))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LDSIHETSARLLFMAVKWAKNLPVFSSLPFRDQVILLEEAWSELFLLGAIQWSLPLDSCPLLAPP-----------LTLASMETRVLQETISRFRALAVDPTEFACMKALVLFKPETRGLKDPEHVEALQDQSQVMLSQHSKAHHPSQPVRFGKLLLLLPSLRFITAERIELLFFRKTIGNTPMEKLLSDMF--------------


General information:
TITO was launched using:
RESULT:

Template: 4LOG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130466 for 1304 contacts (-100.1/contact) +
2D Compatibility (PS) -19550 + (NN) -11350 + (LL) 7104
1D Compatibility (HY) -18000 + (ID) 4300
Total energy: -176562.0 ( -135.40 by residue)
QMean score : 0.584

(partial model without unconserved sides chains):
PDB file : Tito_4LOG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LOG-query.scw
PDB file : Tito_Scwrl_4LOG.pdb: