Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLGKQASAEEDSFADGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHNS
4MCC Chain:A ((1-219))
MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLG-------------LLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLR---------------------------
General information:
TITO was launched using:
RESULT:
Template:
4MCC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139277 for 1481 contacts (-94.0/contact) +
2D Compatibility (PS) -22080 + (NN) -7443 + (LL) 2752
1D Compatibility (HY) -30800 + (ID) 10300
Total energy: -207148.0 ( -139.87 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_4MCC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MCC-query.scw
PDB file :
Tito_Scwrl_4MCC.pdb
: