Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNITNCTTEASMAIRPKTITEKMLICMTLVVITTLTTLLNLAVIMAIGTTKKLHQPANYLICSLAVTDLLVAVLVMPLSIIYIVMDRWKLGYFLCEVWLSVDMTCCTCSILHLCVIALDRYWAITNAIEYARKRTAKRAALMILTVWTISIFISMPPL---FWRSHR----RLSPPPSQCTIQHDHVIYTIYSTLGAFYIPLTLILILYYRIYHAAKSLYQKRGSSRHLSNRSTDSQNSFASCKLTQTFCVSDFSTSDPTTEFEKFHASIRIPPFDNDLDHPGERQQISSTRERKAARILGLILGAFILSWLPFFIKELIVGLSIYTVSSEVADFLTWLGYVNSLINPLLYTSFNEDFKLAFKKLIRCREHT
4AMJ Chain:A ((14-299))----------------------MSLLMALVVLLIVAG--NVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRA-YAIASSIISFYIPLLIMIFVALR-------VYREAKEQ------------S-----------------------------------------------RVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCR-SPDFRKAFKRLLA-----


General information:
TITO was launched using:
RESULT:

Template: 4AMJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -259764 for 1999 contacts (-129.9/contact) +
2D Compatibility (PS) -27546 + (NN) -8959 + (LL) 5808
1D Compatibility (HY) -35600 + (ID) 5350
Total energy: -331411.0 ( -165.79 by residue)
QMean score : 0.398

(partial model without unconserved sides chains):
PDB file : Tito_4AMJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AMJ-query.scw
PDB file : Tito_Scwrl_4AMJ.pdb: