Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWNATPSEEPGFNLTLADLDWDASPGNDSLGDELLQLFPAPLLAGVTATCVALFVVGIAGNLLTMLVVSR---FRELRTTTNLYLSSMAFSDLLIFLC-MPLDLVR-LWQYRPWNFGDLLCKLFQFVSESCTYATVLTITALSVERYFAICFPLRAKVVVTKGRVKLVIFVIWAVAFCSAGPIFVLVGVEHE--NGTDPWDTNECRPTEFAVRSGLLTVMVWVSSIFFFL-PVFCLTVLYSLIGRKLWRRRRGDAVVGASLRDQNHKQTVKMLAVVVFAFILCWLPFHVGRYLFSK-SFEPGSLEIAQISQYCNLVSFVLFYLSAAINPILYNIMSKKYRVAVFRLLGFEPFSQRKLSTLKDESSRAWTESSINT |
| 4XES Chain:A ((35-345)) | ---------------------------------------------VTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGTHPGGL-VCTPI---VDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMV--------PGRVQALRHGVLVLRAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALFYASSAINPILYNLVSANFRQVFLSTNIFEMLRIDEGLRLKIYKDTEGYYTIGIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XES.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -232784 for 1989 contacts (-117.0/contact) +
2D Compatibility (PS) -27787 + (NN) -9522 + (LL) 2184
1D Compatibility (HY) -32000 + (ID) 5400
Total energy: -305309.0 ( -153.50 by residue)
QMean score : 0.352
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