Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTGPDQSYFSGNHWFVFSVYLLTFLVGLPLNLLALVVFVGKLRCRPVAVDVLLLNLTASDLLLLLFLPFRMVEAANGMHWPLPFILCPLSGFIFFTTIYLTALFLAAVSIERFLSVAHPLWYKTRPRLGQAGLVSVACWLLASAHCSVVYVIEFSGDISHSQGTNGTCYLEFWKDQLAILLPVRLEMAVVL--FVVPLIITSYCYSRLVWILGRGGSHRRQRRVAGLVAATLLNFLVCFGPYNVS------HVVGYICGESPVWR------IYVTLLSTLNSCVDPFVYYFSSSGFQADFHELLRRLCGLWGQWQQESSMELKEQKGGEEQRADRPAERKTSEHSQGCGTGGQVACAEN |
| 4XT1 Chain:A ((47-314)) | -------------------LYGVVFLFGSIGNFLVIFTITWRRRIQ-CSGDVYFINLAAADLLFVCTLPLWMQYLLD-------SVPCTLLTACFYVAMFASLCFITEIALDRYYAI---VYMRYRP-VKQACLFSIFWWIFA-----VIIAIPHFMVVTKKDNQCMTDY-----DYLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKGRIVRVLIAVVLV-FIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAEFR--------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -234175 for 1787 contacts (-131.0/contact) +
2D Compatibility (PS) -25288 + (NN) -6540 + (LL) 3828
1D Compatibility (HY) -34800 + (ID) 3550
Total energy: -300525.0 ( -168.17 by residue)
QMean score : 0.269
|
|
|