Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNASAASLNDSQVVVVAAEGAAAAATAAGGPDTGEWGPPAAAALGAGGGANGSLELSSQLSAGPPGLLLPAVNPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLLTVGFLVASF-------------AASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPV-LGW---------NCLAERAACSVVRPLARSHVALLSAAFFMVFGIMLHLYVRICQVVWRHAHQI--ALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAVYTYATLL---PATYNSMINPIIYAFRNQEIQRALWLLLCGCFQSKVPFRSRSPSEV |
4QKX Chain:A ((200-462)) | -----------------------------------------------------------------------------------------NVLVITAIAKFERLQTVTNYFITSLACADLVMGLAV---------VPFGAACILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQAYA-IASSIVSFYVPLVIMVFVYSRVFQEAKRQLQ--KFALKEH-----------KALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QKX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173981 for 1577 contacts (-110.3/contact) +
2D Compatibility (PS) -23848 + (NN) -10351 + (LL) 6712
1D Compatibility (HY) -22400 + (ID) 3900
Total energy: -227768.0 ( -144.43 by residue)
QMean score : 0.129
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