Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANYSHAADNILQNLSPLTAFLKLTSLGFIIGVSVVGNLLISILLVKDKTLHRAPYYFLLDLCCSDILRSAICFPFVFNSVKNGSTWTYGTLTCKVIAFLGVLSCFHTAFMLFCISVTRYLAIAHHRFYTKRLTFWTCLAVICMVWTLSVAMAFPPVLDVGTYSFIREEDQ-----------CTF-QHRSFRANDSLGFMLLLALILLATQLVYLKLIFFVHDRRKMKPVQFVAAVSQNWTFHGPGASGQAAANWLAGFGRGPTPPTLLGIRQNANTTGRRRLLVLDEFKMEKRISRMFYIMTFLFLTLWGPYLVACYWRVFARGPVVPGGFLTAAVWMSFAQAGINPFVCIFSNRELRRCFSTTLLYCRKSRLPREPYCVI |
| 2Y03 Chain:A ((18-300)) | --------------------------MALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRG-TWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIM----MHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLI-----MIFVALRVYREAKEQIR--------------------------------------------------SR--VMLMREHKALKTLG----IIMGVFTLCWLPFFLVNIVNVFNRD-LVPDWLFVAFNWLGYANSAMNPIIYCRSP-DFRKAFKRLLA--------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Y03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -282833 for 1945 contacts (-145.4/contact) +
2D Compatibility (PS) -26288 + (NN) -7757 + (LL) 6112
1D Compatibility (HY) -29200 + (ID) 3400
Total energy: -343366.0 ( -176.54 by residue)
QMean score : 0.319
|
|
|