Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRHHLQDHFLEIDKKNCCVFRDDFIAKVLPPVLGLEFIFGLLGNGLALWIFCFHLKSWKSSRIFLFNLAVADFLLIICLPFVMDYYVRRSDWKFGDIPCRLVLFMFAMNRQGSIIFLTVVAVDRYFRVVHPHHALNKISNWTAAIISCLLWGITVGLTVHLLKKKLLIQNGTANVCISFSICHTFRWHEA----MFLLEFFLPLGIILFCSARIIWSLR-------QRQMDRHAKIKRAITFIMVVAIVFVICFLPSVVVRIHIF---WLLHTSGTQNCEVYRSVDLAFFITLSFTYMNSMLDPVVYYFSSPSFPNFFSTLINRCLQRKITGEPDNNRSTSVELTGDPNKTRGAPEALIANSGEPWSPSYLGPTSNNHSKKGHCHQEPASLEKQLGCCIE |
| 4RWD Chain:A ((136-406)) | ----------------------------------------GLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMET-WPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRS--LRRITRMVLVVVGAFVVCWAP-----IHIFVIVWTLVDIDRRDPLVVA----ALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244851 for 1906 contacts (-128.5/contact) +
2D Compatibility (PS) -26405 + (NN) -5938 + (LL) 6160
1D Compatibility (HY) -26800 + (ID) 4250
Total energy: -302084.0 ( -158.49 by residue)
QMean score : 0.224
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