Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVIMGQCYYNETIGFFYNNSGKELSSHWRPKDVVVVALGLTVSVLVL---LTNLLVIAAIASNRRFHQPIYYLLGNLAAADLFAGVAYL-FLMFHTGPRTARLSLEGWFLRQGLLDT-SLTASVATLLAIAVERHRSVMA-VQLHSRLPRGRVVMLIVGVWVAALGLGLLP--------AHSWHCLC-ALDRCSRMAPLLSRSYLAVWALSSLLV-FLLMVAVYTRIFFYVRRRVQRMAEHVSCHPRYRETTLSLVKTVVIILGAFVVCWTPGQVVLLLDGLGCESCNVLAVEKYFLL--LAEANSLVNAAVYSCRDAEMRRTFRRLLCCACLRQSTRESVHYTSSAQGGASTRIMLPENGHPLMDSTL |
| 4GBR Chain:A ((1-286)) | ------------------------------DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFG-NFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDF--FTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKF--CLKEHKA-----LKTLGIIMGTFTLCWLPFFIVNIVHVI---QDNLIRKEVYILLNWIGYVNSGFNPLIY-CRSPDFRIAFQELL---CL------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210942 for 1916 contacts (-110.1/contact) +
2D Compatibility (PS) -27745 + (NN) -14439 + (LL) 4184
1D Compatibility (HY) -30000 + (ID) 4350
Total energy: -283292.0 ( -147.86 by residue)
QMean score : 0.230
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