Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNECHYDKHMDFFYNRSNTDTVDDWTGTKLVIVLCVGTFFCLFIFFSNSLVIAAVIKNRKFHFPFYYLLANLAAADFFAGIAYVFLMFNTGPVSKTLTVNRWFLRQGLLDSSL------TASLTNLLVIAVERHMSI-MRMRVHSNLTKKRVTLLILLVWAIAIFMGAVPTLGWN------CLCNISAC--SSLAPIYSRSYLVFWTVSNLMAFLIMVVVYLRIYVYVKRKTNVLSPHTSGSISRRRTPMKLM---KTVMTVLGAFVVCWTPGLVVLLLDGLNCRQCGVQHVKRWFLLLALL----NSVVNPIIYSYKDEDMYGTMKKMICCFSQENPERRPSRIPSTVLSRSDTGSQYIEDSISQGAVCNKSTS |
| 3REY Chain:A ((23-303)) | ----------------------------------------------GNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAI-------PFAITISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQPGCGEGQVACLFEDVVPMNYMVYFNFFACV-LVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLP-LHIINCFTFFCPDC--SHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3REY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199102 for 1785 contacts (-111.5/contact) +
2D Compatibility (PS) -25741 + (NN) -10372 + (LL) 5076
1D Compatibility (HY) -23600 + (ID) 3900
Total energy: -257639.0 ( -144.34 by residue)
QMean score : 0.263
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