Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDPTVPVFGTKLTPINGREETPCY-----NQTLSFTV-LTCIISLVGLTGNAVVLWLLGYRMR-RNAVSIYILNLAAADFLFLSFQIIRLPLRLINI--SHLIRKILVSVMTFPYFTGLSMLSAISTERCLSVLWPIWYRCRRPTHLSAVVCVLLWGLSLLFSMLEWRFCDFLFSGADSSWCETS-DFIPVAWLIFLCVVLCVSSLVL-----------LVRILCGSRKMPLTRLYVTILLTVLVFLLCGLPFGILGALIYRMHL--------NLEVLYCHVYLVCMSLSSLNSSANPIIYFFVGS-FRQRQNRQNLKLVLQRALQDKPEVDKGEGQLPEESLELSGSRLGP |
4XT3 Chain:A ((26-309)) | -----------------EDATPCVFTDVLNQSKPVTLFLYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLF----VCTLPLWMQYLLDH---ASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYMRYRPVKQACLFSIFWWIFAVIIAIPH-----FMVVTKKDNQCMTDYDYLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKGRIVRVLIAVVLVFIIFWLPYH-LTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAE---------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -232943 for 1777 contacts (-131.1/contact) +
2D Compatibility (PS) -25142 + (NN) -10909 + (LL) 4108
1D Compatibility (HY) -29200 + (ID) 3450
Total energy: -297536.0 ( -167.44 by residue)
QMean score : 0.254
|
|
|