Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSENGSFANCCEAGGWAVRPGWSGAGSARPSRTPRPPWVAPALSAVLIVTTAVDVVGNLLVILSVLRNRKLRNAGNLFLVSLALADLVVAFYPYPLILVAIFYDGWALGEEHCKASAFVMGLSVIGSVFNITAIAINRYCYICHSMAYHRIYRRWHTPLHICLIWLLT-VVALLPNFFVGSLEYDPRIYS-------CTFIQTASTQYTAAVVVIHFLLPIAVVSFCYLRIWVLVLQARRKAKPESRLCLKPSDLRSFLTMFVVFVIFAICWAPLNCIGLAVAINPQEMAPQIPEGLFVTSYLLAYFNSCLNAIVYGLLNQNFRREYKRILLALWNPRHCIQDASKGSHAEGLQSPAPPIIGVQHQADAL |
3ZPR Chain:A ((13-299)) | -----------------------------------------GMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRA--YAIASSIISFYIPLLIMIFVALRVYREAKEQ-----------MLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRD----LVPDWLFVAFNWLGYANSAMNPIIY-CRSPDFRKAFKRLL--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -264456 for 1991 contacts (-132.8/contact) +
2D Compatibility (PS) -26610 + (NN) -4937 + (LL) 3784
1D Compatibility (HY) -26800 + (ID) 3700
Total energy: -322719.0 ( -162.09 by residue)
QMean score : 0.314
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