Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRNGSIVTEFILVGFQQSSTSTRALLFALFLALYSLTMAMNGLIIFITSWTDPKLNSPMYFFLGHLSLLDVCFITTTIP---QMLIHLVVRDHIVSFVCCMTQMYFVFCVGVAECILLAFMAYDRYVAICYPLNYVPIISQKVCVRLVGTAWFFGLINGI--FLEYISFREPFRRDNHIESFFCEAPIVIGLSCGDPQFSLWAIFADAI-----------VVILSPMVLTVTSYVHI-------LATILSKASSSGRGKTFST----CASHLTVVIFLYTSAM--------FSYMNPHSTHGPDKDKPFSLLYTIITPMCNPIIYSFRNKEIKEAMVRALGRTRLAQPQSV |
| 3VG9 Chain:A ((14-309)) | -------------------------------LAIAVLAILGNVLVCW-AVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITISTGFCAACHGCLFIAC-----FVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQ-------SQ------------GCGEGQVA--CLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTF-RKIIRSHVLR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -223687 for 1769 contacts (-126.4/contact) +
2D Compatibility (PS) -25167 + (NN) -724 + (LL) 5496
1D Compatibility (HY) -25200 + (ID) 2900
Total energy: -272182.0 ( -153.86 by residue)
QMean score : 0.226
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