Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLANQTLGGDFFLLGIFSQISHPGRLCLLIFSIFLMAVSWNITLILLIHIDSSLHTPMYFFINQLSLIDLTYISVTVPKMLVNQLAKDKTISVLGCGTQMYFYLQLGG--------AECCLLAAMAYDRYVAICHPLRYSVLMSHRVCLLLASGCWFVGSVDGFMLTPIAMSFPFCRSHEIQHFFC-EVPAVLKLSCSDTSLYKIFMYLCCVIMLLIPVTV-ISVS---YYYIILTIHKMNSVEGRK---------KAFTTCSSHITVVSLFYGAAIYNYMLPSSYQTPEKDMMSSFFYTIL------TPVLNPIIYSFRNKDVTRALKKMLSVQKPPY |
| 2Y00 Chain:A ((5-300)) | ----------------LLSQQWEAG-MSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPF--------GATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFL--PIMMH--WWRDEDPQALKCYQDPG-----CCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ-----------SRVMLMREHKALKTLGIIMGVFTLCW----LPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205071 for 1756 contacts (-116.8/contact) +
2D Compatibility (PS) -25292 + (NN) -2351 + (LL) 4160
1D Compatibility (HY) -22000 + (ID) 3550
Total energy: -254104.0 ( -144.71 by residue)
QMean score : 0.090
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