Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTLPTQIAPNSSTSMAPTFLLVGMPGLSGAPSWWTLPLIAVYLLSALGNGTILWIIALQPALHRPMHFFLFLLSVSDIGLVTALMPTLLGIALAGAHTVPASACLLQMVFIHVFSVMESSVLLAMSIDRALAICRPLHYPALLTNGVISKISLAISFRCLGLHLPLPFLLAYMPYCLPQVLTHSYCLHPDVARL---ACPEAWGAA---------YSLFVVLSAMGLDPLLIFFSYGL-----IGKVLQGVESREDRWKAGQTCAAHLSAVL-----LFYIPMILLALINHPEL--PITQHTHTLLSYVHFLLP---PLINPILYSVKMKE--------IRKRILNRLQPRKVGGAQ |
| 4UG2 Chain:A ((6-309)) | ------------------------------SSVYITVEL-AIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIP--FAIAISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVT-GTRAKGIIAICW-------VLSFAIGLTP-----MLGWNNCGQPKEGKAHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQL---------ARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231438 for 1865 contacts (-124.1/contact) +
2D Compatibility (PS) -26503 + (NN) -8759 + (LL) 3364
1D Compatibility (HY) -24400 + (ID) 3650
Total energy: -291386.0 ( -156.24 by residue)
QMean score : 0.338
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