Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPTFNGSVFMPSAFILIGIPGLESVQCWIGIPFSAMYLIGVIGNSLILVIIKYENSLHIPMYIFLAMLAATDIALNTCILPKMLGIFWFHLPEISFDA----CLFQMWLIHSFQAIESGILLAMALDRYVAICIPLRHATIFSQQFLTH-IGLGVTLRAAILIIPSLGLIKCCLKHYRTTVISHSYCEHMAIVKLATEDIRVNKIYGLFVAFAILGFDIIFITLSYVQIFITV-FQLPQKEAR----FKAFNTCIAHI--------------CVFLQFYLLAFFSFFTHRFGSHIP---PYIHILLSNLYLLVPPFLNPIVYGVKTKQIRDHIVKVFFFKKVT |
| 4UHR Chain:A ((15-302)) | ----------------------------------AIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIAI------STGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGK---A---GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC--HAPLWLMYLAIVLSHTNSVV----NPFIYAYRIREFRQTFRKIIRSHVLR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4UHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -249159 for 1932 contacts (-129.0/contact) +
2D Compatibility (PS) -26025 + (NN) -3297 + (LL) 2776
1D Compatibility (HY) -23600 + (ID) 3500
Total energy: -302805.0 ( -156.73 by residue)
QMean score : 0.289
|
|
|