Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIQPMASPSNSSTVPVSEFLLICFPNFQSWQHWLSLPLSLLFLLAMGANTTLLITIQLEASLHQPLYYLLSLLSLLDIVLCLTVIPKVLAIFWYDLRSISFPACFL-QMFIMNSFLPMESC--TFMVMAYDRYVAICHPLRYPSIITNQFVAKASVFIVVRNALLTAPIPILTSLLHYCGENVIENCICANLSVSRLSCDNFTLNRIYQFVAG-WTLLGSDLFLIFLSYTFILRAVLRFKAEGAAV---------KALSTCGSHFILILFFSTILLVVVLTNVA----RKKVPMDILILLNVLHHLIPPALNPIVYGVRTKEIKQGIQKLLQRGR |
| 2Y00 Chain:A ((8-299)) | ---------------------------QQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLV---VRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTR---ARAKVIICTVWA-ISALVSFLPIMMHWWRDEDPQALKCYQDP----GCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ--------SRVMLMREHKALKTLG---IIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGY-ANSAMNPIIY-CRSPDFRKAFKRLLA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230624 for 1930 contacts (-119.5/contact) +
2D Compatibility (PS) -26978 + (NN) -11441 + (LL) 3756
1D Compatibility (HY) -30400 + (ID) 3700
Total energy: -299387.0 ( -155.12 by residue)
QMean score : 0.241
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