Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKANETSPVMGFVLLRLSAHPELEKTFFVLILLMYLVILLGNGVLILVTILDSRLHTPMYFFLGNLSFLDICFTTSSVPLVLDSFLTPQETISFSACAVQMALSFAMAGTECLLLSMMAFDRYVAICNPLRYSVIMSKAAYMPMAASSWAIGGAASVVHTSLAIQLPF---CGDNVINHFTCEILAVLKLACADISINVISMEVTNVIFLGVPVLFISFSYVFI---------ITTILRIPSAEG-RKKVFSTCSAHLTVVIVFYGTLFFMYGKPKSKDSMGADKEDLSDKLIPLFYGVVTPMLNPIIYSLRNKDVKAAVRRLLRPKGFTQ |
2RH1 Chain:A ((45-316)) | -----------------------------IVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSF----LPIQMHWYRATHQEAINCYAEE-------TCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRID--EGLRLKIYKDTEGYYTI-----GIGHLLTKSP----SLNAAKSELDKAIGRNTNGVITKDEAEKLF---NQDVDAAVRGILRNAKLKP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162249 for 1746 contacts (-92.9/contact) +
2D Compatibility (PS) -26577 + (NN) -3788 + (LL) 4984
1D Compatibility (HY) -18800 + (ID) 3500
Total energy: -209930.0 ( -120.23 by residue)
QMean score : 0.213
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