Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTGNWSQVAEFIILGFPHLQGVQIYLFLLLLLIYLMTVLGNLLIFLVVCLDSRLHTPMYHFVSILSFSELGYTAATIPKMLANLLSEKKTISFSGCLLQIYFFHSLGATECYLLTAMAYDRYLAICRPLHYPTLMTPTLCAEIAIGCWLGGLAGPVVEISLISRLPF--------CGPNRIQHVFCDFPPVLSLACTDTSINVLVDFVINSCKILATFLLILCSYVQIICTVLR---------IPSAAGK---RKAISTCASHFTVVLIFYGSILSMY-VQLKKSYSLDYDQA------LAVVYSVLTPFLNPFIYSLRNKEIKEAVRRQLKRIGILA |
| 3VG9 Chain:A ((14-304)) | -------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIP--FAITISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFA-----IGLTPMLGWNNCGQSQGCGEGQVACLFEDVVP----------MNYMVYFNFFAC-VLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -270764 for 1966 contacts (-137.7/contact) +
2D Compatibility (PS) -25974 + (NN) -9178 + (LL) 4096
1D Compatibility (HY) -29200 + (ID) 3950
Total energy: -334970.0 ( -170.38 by residue)
QMean score : 0.399
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