Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAAIRRQRELSILPKVTLEAMNTTVMQGFNRSERCPRDTRIVQLVFPALYTVVFLTGILLNTLALWVFVHIPSSSTFI-IYLKNTLVADLIMTLMLPFKILSDSHLAPWQLRAFVCRFSSVIFYETMYVGIVLLGLIAFDRFLKIIRPLRNIFLKKPVFAKTVSIFIWFFLFFISLPNTILSNKEATPSSVKKCASLKGPLGLKWHQMVNNICQFIF---WTVFILMLVFYVVIAK-KVYDSYRKSKSKDRKNNKKLEGKVFVVVAVFFVCFAPFH-------FARVPYTHSQTNNKTDCRLQNQLFIAKETTLFLAATNICMDPLIYIFLCKKFTEKLPCMQGRKTTASSQENHSSQTDNITLG |
| 5C1M Chain:A ((22-292)) | ------------------------------------------------ALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSV-NYLMGTWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHP-TWYWENLL-KICVFIFAFIMPVLIITVCYGLMILRLKSVRMLSGSKEKDR-NLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSWHFC-------------IALGYTNSCLNPVLYAFLDENFKRCF-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5C1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214277 for 1867 contacts (-114.8/contact) +
2D Compatibility (PS) -25826 + (NN) -7367 + (LL) 6740
1D Compatibility (HY) -30400 + (ID) 4000
Total energy: -275130.0 ( -147.36 by residue)
QMean score : 0.227
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