Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLMASTTSAVPGHPSLPSLPSNSSQERPLDTRDPLLARAELALLSIVFVAVALSNGLVLAALARRGRRGHWAPIHVFIGHLCLADLAVALFQVLPQLAWKATDRFRGPDALCRAVKYLQMVGMYASSYMILAMTLDRHRAICRPMLAYRHGSGAHWNRPVLVAWAFSLLLSLPQLFIFAQRNVEGGSGVTDCWACFAEP---WGRRTYVTWIALMVFVAPTLGIAACQ-VLIFREIHASLVPGPSERPGGRRRGRRTGSPGEGAHVSAAVAKTVRMTLVIVVVYVLCWAP---FFLVQLWAAWDPEAPLEGAPFVLLMLLASLNSCTNPWIYASFSSSVSSELRSLLCCARGRTPPSLGPQDESCTTASSSLAKDTSS |
| 4RWD Chain:A ((121-405)) | -----------------------------------LAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIF--NLALAD-ALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGA---VVCMLQFPSPSWYWDTVTKIC-VFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRR-------------------ITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195754 for 2128 contacts (-92.0/contact) +
2D Compatibility (PS) -29564 + (NN) -15556 + (LL) 2596
1D Compatibility (HY) -23200 + (ID) 4200
Total energy: -265678.0 ( -124.85 by residue)
QMean score : 0.311
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