Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTPCEE----ATNLLTPCLRYLWA------PPEAKPSPECCSGLDKVNKGVKTYDDRHDMCICLSSEAAITSADQYKFDNLP---KLCNVALFAPVGPKFD--CSTIKV--------------------
1HSS Chain:A ((5-124))
--MCYPGQAFQVPALPACRPLLRLQCNGSQVP-EAVLRDCCQQLAHIS----------EWCRCGALYSMLDS--MYKEH---GAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34977 for 483 contacts (-72.4/contact) +
2D Compatibility (PS) -7777 + (NN) 1683 + (LL) 640
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -45231.0 ( -93.65 by residue)
QMean score : 0.196
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: